Wenxiu Ma - Publications
Google Scholar Profile
V Ramani, DA Cusanovich, RJ Hause, W Ma, R Qiu, X Deng, CA Blau, CM Disteche, WS Noble, J Shendure, Z Duan.
“Mapping three-dimensional genome architecture through in situ DNase Hi-C.”
Nature Protocols. 11(11):2104-2121, 2016.
X Deng*, W Ma*, V Ramani, A Hill, F Yang, F Ay, JB Berletch, CA Blau, J Shendure, Z Duan, WS Noble, CM Disteche.
“Bipartite structure of the inactive mouse X chromosome.”
Genome Biology. 16:152, 2015.
F Yang, X Deng, W Ma, JB Berletch, N Rabaia, G Wei, JM Moore, GN Filippova, J Xu, Y Liu, WS Noble, J Shendure, CM Disteche.
“The lncRNA Firre anchors the inactive X chromosome to the nucleolus by binding CTCF and maintains H3K27me3 methylation.”
Genome Biology. 16:52, 2015.
W Ma, F Ay, C Lee, G Gulsoy, X Deng, S Cook, J Hesson, C Ware, T Krumm, J Shendure, CA Blau, CM Disteche, WS Noble, Z Duan.
“Fine-scale chromatin interaction maps reveal the cis-regulatory landscape of human lincRNA genes.”
Nature Methods. 12(1):71-78, 2015.
J Cao, J Ni, W Ma, V Shiu, LA Milla, S Park, ML Spletter, S Tang, J Zhang, X Wei, SK Kim, MP Scott.
“Insight into insulin secretion from transcriptome and genetic analysis of insulin-producing cells of drosophila.”
Genetics. 197:175-192, 2014.
X Deng, JB Berletch, W Ma, DK Nguyen, JB Hiatt, WS Noble, J Shendure, CM Disteche.
“Mammalian X upregulation is associated with enhanced transcription initiation, RNA half-life, and MOF-mediated H4K16 acetylation.”
Developmental Cell. 25(1):55-68, 2013.
KA Peterson, Y Nishi, W Ma, A Vedenko, L Shokri, X Zhang, M McFarlane, JM Baizabal, JP Junker, A van Oudenaarden, T Mikkelsen, BE Bernstein, TL Bailey, ML Bulyk, WH Wong, AP McMahon.
“Neural-specific Sox2 input and differential Gli-binding affinity provide context and positional information in Shh-directed neural patterning.”
Genes & Development. 26(24):2802-2816, 2012.
JS Park, W Ma, LL O’Brien, E Chung, JJ Guo, JG Cheng, MT Valerius, JA McMahon, WH Wong, AP McMahon.
“Six2 and Wnt regulate self-renewal and commitment of nephron progenitors through shared gene regulatory networks.”
Developmental Cell. 23(3):637-651, 2012.
J Choi, LK Southworth, KY Sarin, AS Venteicher, W Ma, W Chang, P Cheung, S Jun, MK Artandi, N Shah, SK Kim, SE Artandi.
“TERT promotes epithelial proliferation through transcriptional control of a Myc-and Wnt-related developmental program.”
PLOS Genetics. 4(1):e10, 2008.