LBD39
Protein accession = CAB38293
Chromosome locus = At4g37540
BAC/P1 locus = F19F18.30
CDS complement (AL035605: 9998..10536, 10675..10858)
 
cDNA sequence (Sequence of EST clone 701500839)
AATCAAAACCTATTTGCATGCTCTCAAACCCGAATTAAATCGACACTTTT
CAGTTTTTGTTTTAACAAGTAGAGTTTCCCAAAATATTGGATATATTTCT
TTTTCAAATTTCGGAAAAGAAATGAGTTGCAATGGATGTAGAGTTCTTCG
AAAAGGTTGCAGTGAAACATGCATCCTTCGTCCTTGCCTTCAATGGATCG
AATCCGCCGAGTCACAAGGCCACGCCACCGTCTTCGTCGCTAAATTCTTT
GGTCGTGCTGGTCTCATGTCTTTCATCTCCTCCGTACCTGAACTCCAACG
TCCTGCTTTGTTTCAGTCGTTGTTGTTTGAAGCGTGTGGGAGAACGGTGA
ATCCGGTTAACGGAGCGGTTGGTATGTTGTGGACCAGGAACTGGCACGTA
TGCCAAGCGGCGGTTGAGACTGTTCTTCGCGGCGGAACTTTACGACCGAT
ATCAGATCTTCTTGAATCTCCGTCGTTGATGATCTCCTGTGATGAGTCTT
CAGAGATTTGGCATCAAGACGTTTCAAGAAACCAAACCCACCATTGTCGC
TTCTCCACCTCCAGATCCACGACGGAGATGAAAGACTCTCTGGTTAACCG
AAAACGATTGAAGTCCGATTCGGATCTTGATCTCCAAGTGAACCACGGTT
TAACCCTAACCGCTCCGGCTGTACCGGTTCCTTTTCTTCCTCCGTCGTCG
TTTTGTAAGGTGGTTAAGGGTGATCGTCCGGGAAGTCCATCGGAGGAATC
TGTAACGACGTCGTGTTGGGAAAATGGGATGAGAGGAGATAATAAACAAA
AAAGAAACAAAGGAGAGAAAAAGTTATTGAACCTTTTTGTTTAAAACCGA
CGACGCAAAACACTCAA
Additional EST clone = 165E11T7, RZ23c09
 
Open reading frame
atgagttgcaatggatgtagagttcttcgaaaaggttgcagtgaaacatgcatccttcgtccttgccttcaatggatcgaatccgccgag
M  S  C  N  G  C  R  V  L  R  K  G  C  S  E  T  C  I  L  R  P  C  L  Q  W  I  E  S  A  E 
tcacaaggccacgccaccgtcttcgtcgctaaattctttggtcgtgctggtctcatgtctttcatctcctccgtacctgaactccaacgt
S  Q  G  H  A  T  V  F  V  A  K  F  F  G  R  A  G  L  M  S  F  I  S  S  V  P  E  L  Q  R 
cctgctttgtttcagtcgttgttgtttgaagcgtgtgggagaacggtgaatccggttaacggagcggttggtatgttgtggaccaggaac
P  A  L  F  Q  S  L  L  F  E  A  C  G  R  T  V  N  P  V  N  G  A  V  G  M  L  W  T  R  N 
tggcacgtatgccaagcggcggttgagactgttcttcgcggcggaactttacgaccgatatcagatcttcttgaatctccgtcgttgatg
W  H  V  C  Q  A  A  V  E  T  V  L  R  G  G  T  L  R  P  I  S  D  L  L  E  S  P  S  L  M 
atctcctgtgatgagtcttcagagatttggcatcaagacgtttcaagaaaccaaacccaccattgtcgcttctccacctccagatccacg
I  S  C  D  E  S  S  E  I  W  H  Q  D  V  S  R  N  Q  T  H  H  C  R  F  S  T  S  R  S  T 
acggagatgaaagactctctggttaaccgaaaacgattgaagtccgattcggatcttgatctccaagtgaaccacggtttaaccctaacc
T  E  M  K  D  S  L  V  N  R  K  R  L  K  S  D  S  D  L  D  L  Q  V  N  H  G  L  T  L  T 
gctccggctgtaccggttccttttcttcctccgtcgtcgttttgtaaggtggttaagggtgatcgtccgggaagtccatcggaggaatct
A  P  A  V  P  V  P  F  L  P  P  S  S  F  C  K  V  V  K  G  D  R  P  G  S  P  S  E  E  S 
gtaacgacgtcgtgttgggaaaatgggatgagaggagataataaacaaaaaagaaacaaaggagagaaaaagttattgaacctttttgtt
V  T  T  S  C  W  E  N  G  M  R  G  D  N  K  Q  K  R  N  K  G  E  K  K  L  L  N  L  F  V 
 
Amino acid sequence
MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGR 
AGLMSFISSVPELQRPALFQSLLFEACGRTVNPVNGAVGMLWTRN 
WHVCQAAVETVLRGGTLRPISDLLESPSLMISCDESSEIWHQDVS 
RNQTHHCRFSTSRSTTEMKDSLVNRKRLKSDSDLDLQVNHGLTLT 
APAVPVPFLPPSSFCKVVKGDRPGSPSEESVTTSCWENGMRGDNK 
QKRNKGEKKLLNLFV 
 
Protein properties
 
HOME