##############Advice section###################
#
#Are you seeing this message when you try to configure a new database:
#
#Error: Unable to read sequence 'newdb:someid'
#Died: seqret terminated: Bad value for '-sequence' and no prompt
#
#You may of course have set it up all wrong, but you may have just set the default format
#incorrectly. Have a play with the format options and see if this solves your problem
#
#For more info on the formats available under EMBOSS, see:
#
#http://www.hgmp.mrc.ac.uk/Software/EMBOSS/Themes/SequenceFormats.html
#
############NUCLEOTIDE DATABASES###############

DB embl [
       method: srswww
       format: embl
       url: "http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz"
       type: N
        dbalias: embl
        fields: "sv des key org id"
        comment: "EMBL Release from the SRS server at the EBI"
]


DB genbank [
       method: srswww
       format: genbank
       url: "http://www.infobiogen.fr/srs71bin/cgi-bin/wgetz" 
       type: N
        dbalias: genbank
        fields: "sv des key org id"
        comment: "Genbank from the SRS sever at infobiogen.fr"
]


############NUCLEOTIDE RELATED DATABASES##################

DB refseq [
       method: srswww
       format: genbank
       url: "http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz"
       type: N
        dbalias: refseq
        fields: "sv des key org id"
	"Refseq from the SRS server at the EBI"
]



############PEPTIDE DATABASES##################

DB swissprot [
        method: srswww
        format: swissprot
	url: "http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz"
        type: P
        dbalias: uniprot
	fields: "sv des key org id"
	comment: "Swissprot from the SRS server at the EBI (actually UNIPROT)"
]
DB uniprot [
       method: srswww 
       format: swissprot
       url: "http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz"
       type: P
	dbalias: uniprot
	fields: "sv des key org id"
	comment: "Uniprot from the SRS server at the EBI"
]

DB trembl [
       method: srswww 
       format: swissprot
       url: "http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz"
       type: P
        dbalias: trembl
        fields: "sv des key org id"
        comment: "TrEmbl from the SRS server at the EBI (actually UniProt)"
]