-------------------------------------------- Sample of Targets.txt file for limma package -------------------------------------------- SlideNumber FileName Cy3 Cy5 Date 81 swirl.1.spot swirl wild type 2001/9/20 82 swirl.2.spot wild type swirl 2001/9/20 93 swirl.3.spot swirl wild type 2001/11/8 94 swirl.4.spot wild type swirl 2001/11/8 -------------------------------------------- Comments: - Columns 'SlideNumber' and 'Date' are optional. - A 'Name' column can be added to associate plot lables with arrays. - ImaGene stores channel data in separate files. See manual for special format of Targets.txt file.